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Biotechnology

Gene editing accelerates cattle improvement

Calves with shorter hair represent the first uses of CRISPR in animal breeding

The two short-haired calves born at EMBRAPA’s experimental farm in Juiz de Fora

Rubens Neiva / EMBRAPA Dairy Cattle

After nearly ten years of planning, funding battles, team building, and successive refinements to laboratory techniques, a new approach to animal genetic improvement has finally yielded its first results: two Angus calves—a male and a female—from the same sire, with short, smooth, glossy coats, grazing and resting peacefully at EMBRAPA Dairy Cattle’s experimental farm. The pair are the first to be bred in an experiment to induce desirable traits in animals using CRISPR-Cas9 gene editing.

The researchers’ goal was to introduce a genetic mutation that could produce short hair. They selected this trait because it is visible at birth, making it an immediate indicator of whether the experiment worked. This attribute could also enhance the animals’ heat tolerance compared with long-haired cattle.

In the lab, the EMBRAPA Dairy Cattle team, based in Juiz de Fora, Minas Gerais, created 16 embryos, which were implanted in late June 2024 into 16 cows that had been prepared to receive them. Six pregnancies progressed, though one ended before term. In the last week of April and the first week of March, five calves were born. Each showed a different degree of gene-editing efficiency, with incorporation rates ranging from 0% to 83%. Two calves were born with 74% and 83% genome editing, denoted by their short coats. Of the remaining three, two had long coats and no genome edits, while one, with an intermediate coat length, had 50% editing but died at 41 days from a bacterial infection.

“With precision breeding through gene editing, we can achieve in just a few years what nature would take decades to do,” says veterinarian Luiz Sérgio de Almeida Camargo, who is leading the project. Cattle brought from Portugal and Spain to Latin America and the Caribbean during colonization had long hair. Over time, some of their descendants developed natural mutations that produced a short coat. This trait enables the animals to regulate their body temperature more efficiently, reducing the stress caused by the intense heat and humidity of tropical and subtropical climates. Heat stress compromises animal welfare and leads to losses in both meat and milk production (see Pesquisa FAPESP issue n° 340).

Through crossbreeding and selection over multiple generations—the basis of conventional genetic improvement—developing new traits in livestock can take decades, far longer than in plants. “Fixing a trait in a cattle population can require five or more generations,” Camargo notes. He explains that precision breeding, when the gene controlling the trait is known, can lock in the desired characteristic in just two or three generations—without altering other traits as often happens with conventional methods.

Camargo recalls first discussing the potential of gene editing in cattle with colleagues in Brazil and abroad back in 2014. In 2022, he secured the project’s first funding through an innovation grant from the Brazilian Micro and Small Business Support Service (SEBRAE). Additional backing soon followed from the Minas Gerais State Research Foundation (FAPEMIG) and the Brazilian National Council for Scientific and Technological Development (CNPq).

He also partnered with the Brazilian Angus and Ultrablack Association, which provided the cows that carried the edited embryos. An article published in February 2022 in CABI Agriculture and Bioscience, and another in February 2023 in Animal Reproduction, outlined the EMBRAPA team’s approach to using CRISPR for cattle breeding. The paper presenting their most recent findings is still in preparation.

The genetic modification process builds on in vitro fertilization, with other methods layered in. “For nearly two years, we tested another approach for delivering edits into cells—microinjection—and an alternative gene-editing system, TALEN [transcription activator-like effector nucleases], but yields were consistently low,” Camargo says. Beginning in 2023, mutation rates tripled when the team combined CRISPR with a method called electroporation.

Electroporation uses high-voltage pulses lasting just microseconds to open temporary pores in the membranes of reproductive cells. Through these pores passes a molecule made of RNA and an enzyme that acts on DNA to create the intended genetic change (see infographic below).

Alexandre Affonso / Pesquisa FAPESP

This truncates the protein that forms the cell-surface receptor for the hormone prolactin. The shortened receptor, when activated by prolactin, results in a shorter hair coat. “Milk production is holding steady,” Camargo says. “Our most innovative step was combining in vitro–fertilized embryos with electroporation and gene editing to address a local challenge—improving animal welfare in hot climates.”

In recent years, US-based biotechnology firm Acceligen has also used CRISPR to produce short-haired cattle, and is also pursuing edits in pigs and fish aimed at boosting disease resistance, increasing meat yield, or improving adaptation to tropical regions, particularly in Africa.

“The technology is now well-established and could lead to many other applications,” notes veterinarian Flávio Meirelles of the School of Animal Science and Food Engineering at the University of São Paulo (FZEA-USP) in Pirassununga, who was not involved in the short-haired calf research. Meirelles uses CRISPR to study bovine embryonic development and has already created a transgenic cow capable of producing milk containing human insulin (see Pesquisa FAPESP issue n° 339).

In the coming months, Camargo plans additional tests to ensure no unintended mutations occurred elsewhere in the DNA that could hinder the edited animals’ development. About a year from now, when the male calf reaches sexual maturity, he intends to collect semen samples to determine whether the short-hair mutation is present in the gametes. The results will show whether the trait can be passed on to the next generation.

As CRISPR gene editing becomes more mainstream, says Camargo, it may be possible to attempt more complex edits. One example would be boosting milk production, which depends on multiple genes rather than just one as in the case of coat length. “Causing a gene to partially lose its function, as with short hair, is easier than producing a gain of function or increasing gene expression,” Meirelles explains.

The Juiz de Fora EMBRAPA team plans to establish an initial herd of short-haired animals, which could be distributed to breeders and introduced into Brazil’s Midwest, a naturally hotter region. This would require approval from the National Technical Biosafety Commission (CTNBio).

“The prospects of approval are good—without being overly optimistic—because similar projects have already been successful,” says veterinarian Marcelo Demarchi Goissis from USP’s School of Veterinary Medicine and Animal Science (FMVZ), who studies bovine embryo cell differentiation using CRISPR and was not involved in the Angus research. He notes that, beyond the gene-edited livestock produced in the United States, companies in Argentina and Japan have used CRISPR to create fish that yield more meat than unmodified fish of the same species.

In 2022, CTNBio approved the cultivation of a sugarcane variety developed at EMBRAPA using CRISPR technology (see Pesquisa FAPESP issue n° 313). The argument—likely to be made again—is that these are not transgenic organisms, which are subject to a more bureaucratic approval process, but rather induced mutations that could occur naturally within the species. “Genetically edited organisms contain no DNA from another species. Therefore, they are not transgenic,” Goissis explains.

Alexandre Affonso / Pesquisa FAPESP

The story above was published with the title “Fast-tracking genetic selection” in issue 353 of July/2025.

Scientific articles
DE ALMEIDA CAMARGO, L. S. & PEREIRA, J. F. Genome-editing opportunities to enhance cattle productivity in the tropics. CABI Agriculture and Bioscience. Vol. 3, no. 8. Feb. 14, 2022.
CAMARGO, L. S. A. et al. Perspectives of gene editing for cattle farming in tropical and subtropical regions. Animal Reproduction. Vol. 19, no. 4. 20220108. Feb. 13, 2023.

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